I am not a big fan of using arguments such as “food questionnaires are unreliable” and “observational studies are worthless” to completely dismiss a study. There are many reasons for this. One of them is that, when people misreport certain diet and lifestyle patterns, but do that consistently (i.e., everybody underreports food intake), the biasing effect on coefficients of association is minor. Measurement errors may remain for this or other reasons, but regression methods (linear and nonlinear) assume the existence of such errors, and are designed to yield robust coefficients in their presence. Besides, for me to use these types of arguments would be hypocritical, since I myself have done several analyses on the China Study data (), and built what I think are valid arguments based on those analyses.
My approach is: Let us look at the data, any data, carefully, using appropriate analysis tools, and see what it tells us; maybe we will find evidence of measurement errors distorting the results and leading to mistaken conclusions, or maybe not. With this in mind, let us take a look at the top part of Table 3 of the most recent (published online in March 2012) study looking at the relationship between red meat consumption and mortality, authored by Pan et al. (Frank B. Hu is the senior author) and published in the prestigious Archives of Internal Medicine (). This is a prominent journal, with an average of over 270 citations per article according to Google Scholar. The study has received much media attention recently.
Take a look at the area highlighted in red, focusing on data from the Health Professionals sample. That is the multivariate-adjusted cardiovascular mortality rate, listed as a normalized percentage, in the highest quintile (Q5) of red meat consumption from the Health Professionals sample. The non-adjusted percentages are 1.4 percent mortality in Q5 and 1.13 in Q1 (from Table 1 of the same article); so the multivariate adjustment-normalization changed the values of the percentages somewhat, but not much. The highlighted 1.35 number suggests that for each group of 100 people who consumed a lot of red meat (Q5), when compared with a group of 100 people who consumed little red meat (Q1), there were on average 0.35 more deaths over the same period of time (more than 20 years).
The heavy red meat eaters in Q5 consumed 972.37 percent more red meat than those in Q1. This is calculated with data from Table 1 of the same article, as: (2.36-0.22)/0.22. In Q5, the 2.36 number refers to the number of servings of red meat per day, with each serving being approximately 84 g. So the heavy red meat eaters ate approximately 198 g per day (a bit less than 0.5 lb), while the light red meat eaters ate about 18 g per day. In other words, the heavy red meat eaters ate 9.7237 times more, or 972.37 percent more, red meat.
So, just to be clear, even though the folks in Q5 consumed 972.37 percent more red meat than the folks in Q1, in each matched group of 100 you would not find a single additional death over the same time period. If you looked at matched groups of 1,000 individuals, you would find 3 more deaths among the heavy red meat eaters. The same general pattern, of a minute difference, repeats itself throughout Table 3. As you can see, all of the reported mortality ratios are 1-point-something. In fact, this same pattern repeats itself in all mortality tables (all-cause, cardiovascular, cancer). This is all based on a multivariate analysis that according to the authors controlled for a large number of variables, including baseline history of diabetes.
Interestingly, looking at data from the same sample (Health Professionals), the incidence of diabetes is 75 percent higher in Q5 than in Q1. The same is true for the second sample (Nurses Health), where the Q5-Q1 difference in incidence of diabetes is even greater - 81 percent. This caught my eye, being diabetes such a prototypical “disease of affluence”. So I entered the whole data reported in the article into HCE () and WarpPLS (), and conducted some analyses. The graphs below are from HCE. The data includes both samples – Health Professionals and Nurses Health.
HCE calculates bivariate correlations, and so does WarpPLS. But WarpPLS stores numbers with a higher level of precision, so I used WarpPLS for calculating coefficients of association, including correlations. I also double-checked the numbers with other software, just in case (e.g., SPSS and MATLAB). Here are the correlations calculated by WarpPLS, which refer to the graphs above: 0.030 for red meat intake and mortality; 0.607 for diabetes and mortality; and 0.910 for food intake and diabetes. Yes, you read it right, the correlation between red meat intake and mortality is a very low and non-significant 0.030 in this dataset. Not a big surprise when you look at the related HCE graph, with the line going up and down almost at random. Note that I included the quintiles data from both the Health Professionals and Nurses Health samples in one dataset.
Those folks in Q5 had a much higher incidence of diabetes, and yet the increase in mortality for them was significantly lower, in percentage terms. A key difference between Q5 and Q1 being what? The Q5 folks ate a lot more red meat. This looks suspiciously suggestive of a finding that I came across before, based on an analysis of the China Study II data (). The finding was that animal food consumption (and red meat is an animal food) was protective, actually reducing the negative effect of wheat flour consumption on mortality. That analysis actually suggested that wheat flour consumption may not be so bad if you eat 221 g or more of animal food daily.
So, I built the model below in WarpPLS, where red meat intake (RedMeat) is hypothesized to moderate the relationship between diabetes incidence (Diabetes) and mortality (Mort). Below I am also including the graphs for the direct and moderating effects; the data is standardized, which reduces estimation error, particularly in moderating effects estimation. I used a standard linear algorithm for the calculation of the path coefficients (betas next to the arrows) and jackknifing for the calculation of the P values (confidence = 1 – P value). Jackknifing is a resampling technique that does not require multivariate normality and that tends to work well with small samples; as is the case with nonparametric techniques in general.
The direct effect of diabetes on mortality is positive (0.68) and almost statistically significant at the P < 0.05 level (confidence of 94 percent), which is noteworthy because the sample size here is so small – only 10 data points, 5 quintiles from the Health Professionals sample and 5 from the Nurses Health sample. The moderating effect is negative (-0.11), but not statistically significant (confidence of 61 percent). In the moderating effect graphs (shown side-by-side), this negative moderation is indicated by a slightly less steep inclination of the regression line for the graph on the right, which refers to high red meat intake. A less steep inclination means a less strong relationship between diabetes and mortality – among the folks who ate the most red meat.
Not too surprisingly, at least to me, the results above suggest that red meat per se may well be protective. Although we should consider a least two other possibilities. One is that red meat intake is a marker for consumption of some other things, possibly present in animal foods, that are protective - e.g., choline and vitamin K2. The other possibility is that red meat is protective in part by displacing other less healthy foods. Perhaps what we are seeing here is a combination of these.
Whatever the reason may be, red meat consumption seems to actually lessen the effect of diabetes on mortality in this sample. That is, according to this data, the more red meat is consumed, the fewer people die from diabetes. The protective effect might have been stronger if the participants had eaten more red meat, or more animal foods containing the protective factors; recall that the threshold for protection in the China Study II data was consumption of 221 g or more of animal food daily (). Having said that, it is also important to note that, if you eat excess calories to the point of becoming obese, from red meat or any other sources, your risk of developing diabetes will go up – as the earlier HCE graph relating food intake and diabetes implies.
Please keep in mind that this post is the result of a quick analysis of secondary data reported in a journal article, and its conclusions may be wrong, even though I did my best not to make any mistake (e.g., mistyping data from the article). The authors likely spent months, if not more, in their study; and have the support of one of the premier research universities in the world. Still, this post raises serious questions. I say this respectfully, as the authors did seem to try their best to control for all possible confounders.
I should also say that the moderating effect I uncovered is admittedly a fairly weak effect on this small sample and not statistically significant. But its magnitude is apparently greater than the reported effects of red meat on mortality, which are not only minute but may well be statistical artifacts. The Cox proportional hazards analysis employed in the study, which is commonly used in epidemiology, is nothing more than a sophisticated ANCOVA; it is a semi-parametric version of a special case of the broader analysis method automated by WarpPLS.
Finally, I could not control for confounders because, given the small sample, inclusion of confounders (e.g., smoking) leads to massive collinearity. WarpPLS calculates collinearity estimates automatically, and is particularly thorough at doing that (calculating them at multiple levels), so there is no way to ignore them. Collinearity can severely distort results, as pointed out in a YouTube video on WarpPLS (). Collinearity can even lead to changes in the signs of coefficients of association, in the context of multivariate analyses - e.g., a positive association appears to be negative. The authors have the original data – a much, much larger sample - which makes it much easier to deal with collinearity.
Moderating effects analyses () – we need more of that in epidemiological research eh?
Showing posts with label HCE. Show all posts
Showing posts with label HCE. Show all posts
Monday, March 19, 2012
Monday, February 27, 2012
Gaining muscle and losing fat at the same time: If I can do it, anyone can
The idea of gaining muscle and losing fat at the same time seems impossible because of three widely held misconceptions: (a) to gain muscle you need a calorie surplus; (b) to lose fat you need a calorie deficit; and (c) you cannot achieve a calorie surplus and deficit at the same time.
Not too long ago, unfortunately I was in the right position to do some self-experiments in order to try to gain muscle and concurrently lose fat, without steroids, keeping my weight essentially constant (within a range of a few lbs). This was because I was obese, and then reached a point in the fat loss stage where I could stop losing weight while attempting to lose fat. This is indeed difficult and slow, as muscle gain itself is slow, and it apparently becomes slower as one tries to restrict fat gain. Compounding that is the fact that self-experimentation invariably leads to some mistakes.
The photos below show how I looked toward the end of my transformation from obese to relatively lean (right), and then about 1.5 years after that (left). During this time I gained muscle and lost fat, in equal amounts. How do I know that? It is because my weight is the same in both photos, even though on the left my body fat percentage is approximately 5 points lower. I estimate it to be slightly over 12 percent (on the left). This translates into a difference of about 7.5 lbs, of “fat turning into muscle”, so to speak.
A previous post on my transformation from obese to relatively lean has more measurement details (). Interestingly, I am very close to being overweight, technically speaking, in both photos above! That is, in both photos I have a body mass index that is close to 25. In fact, after putting on even a small amount of muscle, like I did, it is very easy for someone to reach a body mass index of 25. See the table below, from the body mass index article on Wikipedia ().
As someone gains more muscle and remains lean, approaching his or her maximum natural muscular potential, that person will approach the limit between the overweight and obese areas on the figure above. This will happen even though the person may be fairly lean, say with a body fat percentage in the single digits for men and around 14-18 percent for women. This applies primarily to the 5’7’’ – 5’11’’ range; things get somewhat distorted toward the extremes.
Contrast this with true obesity, as in the photo below. This photo was taken when I was obese, at the beach. If I recall it properly, it was taken on the Atlantic City seashore, or a beach nearby. I was holding a bottle of regular soda, which is emblematic of the situation in which many people find themselves in today’s urban societies. It reminds me of a passage in Gary Taubes’s book “Good Calories, Bad Calories” (), where someone who had recently discovered the deliciousness of water sweetened with sugar wondered why anyone “of means” would drink plain water ever again.
Now, you may rightfully say that a body composition change of about 7.5 lbs in 1.5 years is pitiful. Indeed, there are some people, typically young men, who will achieve this in a few months without steroids. But they are relatively rare; Scooby has a good summary of muscle gain expectations (). As for me, I am almost 50 years old, an age where muscle gain is not supposed to happen at all. I tend to gain fat very easily, but not muscle. And I was obese not too long ago. My results should be at the very low end of the scale of accomplishment for most people doing the right things.
By the way, the idea that muscle gain cannot happen after 40 years of age or so is another misconception; even though aging seems to promote muscle loss and fat gain, in part due to natural hormonal changes. There is evidence that many men may experience of low point (i.e., a trough) in their growth hormone and testosterone levels in their mid-40s, possibly due to a combination of modern diet and lifestyle factors. Still, many men in their 50s and 60s have higher levels ().
And what are the right things to do if one wants to gain muscle and lose fat at the same time? In my next post I will discuss the misconceptions mentioned at the beginning of this post, and a simple approach for concurrently gaining muscle and losing fat. The discussion will be based on my own experience and that of several HCE () users. The approach relies heavily on individual customization; so it will probably be easier to understand than to implement. Strength training is part of this simple strategy.
One puzzling aspect of strength training, from an evolutionary perspective, is that people tend to be able to do a lot more of it than is optimal for them. And, when they do even a bit more than they should, muscle gain stalls or even regresses. The minimalists frequently have the best results.
Not too long ago, unfortunately I was in the right position to do some self-experiments in order to try to gain muscle and concurrently lose fat, without steroids, keeping my weight essentially constant (within a range of a few lbs). This was because I was obese, and then reached a point in the fat loss stage where I could stop losing weight while attempting to lose fat. This is indeed difficult and slow, as muscle gain itself is slow, and it apparently becomes slower as one tries to restrict fat gain. Compounding that is the fact that self-experimentation invariably leads to some mistakes.
The photos below show how I looked toward the end of my transformation from obese to relatively lean (right), and then about 1.5 years after that (left). During this time I gained muscle and lost fat, in equal amounts. How do I know that? It is because my weight is the same in both photos, even though on the left my body fat percentage is approximately 5 points lower. I estimate it to be slightly over 12 percent (on the left). This translates into a difference of about 7.5 lbs, of “fat turning into muscle”, so to speak.
A previous post on my transformation from obese to relatively lean has more measurement details (). Interestingly, I am very close to being overweight, technically speaking, in both photos above! That is, in both photos I have a body mass index that is close to 25. In fact, after putting on even a small amount of muscle, like I did, it is very easy for someone to reach a body mass index of 25. See the table below, from the body mass index article on Wikipedia ().
As someone gains more muscle and remains lean, approaching his or her maximum natural muscular potential, that person will approach the limit between the overweight and obese areas on the figure above. This will happen even though the person may be fairly lean, say with a body fat percentage in the single digits for men and around 14-18 percent for women. This applies primarily to the 5’7’’ – 5’11’’ range; things get somewhat distorted toward the extremes.
Contrast this with true obesity, as in the photo below. This photo was taken when I was obese, at the beach. If I recall it properly, it was taken on the Atlantic City seashore, or a beach nearby. I was holding a bottle of regular soda, which is emblematic of the situation in which many people find themselves in today’s urban societies. It reminds me of a passage in Gary Taubes’s book “Good Calories, Bad Calories” (), where someone who had recently discovered the deliciousness of water sweetened with sugar wondered why anyone “of means” would drink plain water ever again.
Now, you may rightfully say that a body composition change of about 7.5 lbs in 1.5 years is pitiful. Indeed, there are some people, typically young men, who will achieve this in a few months without steroids. But they are relatively rare; Scooby has a good summary of muscle gain expectations (). As for me, I am almost 50 years old, an age where muscle gain is not supposed to happen at all. I tend to gain fat very easily, but not muscle. And I was obese not too long ago. My results should be at the very low end of the scale of accomplishment for most people doing the right things.
By the way, the idea that muscle gain cannot happen after 40 years of age or so is another misconception; even though aging seems to promote muscle loss and fat gain, in part due to natural hormonal changes. There is evidence that many men may experience of low point (i.e., a trough) in their growth hormone and testosterone levels in their mid-40s, possibly due to a combination of modern diet and lifestyle factors. Still, many men in their 50s and 60s have higher levels ().
And what are the right things to do if one wants to gain muscle and lose fat at the same time? In my next post I will discuss the misconceptions mentioned at the beginning of this post, and a simple approach for concurrently gaining muscle and losing fat. The discussion will be based on my own experience and that of several HCE () users. The approach relies heavily on individual customization; so it will probably be easier to understand than to implement. Strength training is part of this simple strategy.
One puzzling aspect of strength training, from an evolutionary perspective, is that people tend to be able to do a lot more of it than is optimal for them. And, when they do even a bit more than they should, muscle gain stalls or even regresses. The minimalists frequently have the best results.
Monday, January 2, 2012
HCE user experience: The anabolic range may be better measured in seconds than repetitions
It is not uncommon for those who do weight training to see no gains over long periods of time for certain weight training exercises (e.g., overhead press), even while they experience gains in other types of exercise (e.g., regular squats).
HealthCorrelator for Excel (HCE) and its main outputs, coefficients of association and graphs (), have been helping some creative users identify the reasons why they see no gains, and break out of the stagnation periods.
It may be a good idea to measure the number of seconds of effort per set; in addition to other variables such as numbers of sets and repetitions, and the amount of weight lifted. In some cases, an inverted J curve, full or partial (just the left side of it), shows up suggesting that the number of seconds of effort in a particular type of weight training exercise is a better predictor of muscle gain than the number of repetitions used.
The inverted J curve is similar to the one discussed in a previous post on HCE used for weight training improvement, where the supercompensation phenomenon is also discussed ().
Repetitions in the 6-12 range are generally believed to lead to peak anabolic response, and this is generally true for weight training exercises conducted in good form and to failure. It is also generally believed that muscular effort should be maintained for 20 to 120 seconds for peak anabolic response.
The problem is that in certain cases not even 12 repetitions lead to at least 20 seconds of effort. This is usually the case when the repetitions are performed very quickly. There are a couple of good reasons why this may happen: the person has above-average muscular power, or the range of motion used is limited.
What is muscular power, and why would someone want to limit the range of motion used in a weight training exercise?
Muscular power is different from muscular strength, and is normally distributed (bell curve) across the population, like most human traints (). Muscular power is related to the speed with which an individual can move a certain amount of weight. Muscular strength is related to the amount of weight moved. Frequently people who perform amazing feats of strength, like Dennis Rogers (), have above-average muscular power.
As for limiting the range of motion used in a weight training exercise, one of the advantages of doing so is that it reduces the risk of injury, as a wise commenter pointed out here some time ago (). It also has the advantage of increasing the number of variations of an exercise that can be used at different points in time; which is desirable, as variation is critical for sustained supercompensation ().
The picture below is from a YouTube video clip showing champion natural bodybuilder Doug Miller performing 27 repetitions of the deadlift with 405 lbs (). Doug is one of the co-authors of the book Biology for Bodybuilders, which has been reviewed here ().
The point of showing the video clip above is that the range of repetitions used would be perceived as quite high by many bodybuilders, but is nevertheless the one leading to a peak anabolic response for Doug. If you pay careful attention to the video, you will notice that Doug completes the 27 repetitions in 45 seconds, well within the anabolic range. If he had completed only 12 repetitions, at about the same pace, he would have done that a few seconds before hitting the 20-second mark.
Doug completes those 27 repetitions relatively quickly, because he has above-average muscular power, in addition to having above-average muscular strength.
HealthCorrelator for Excel (HCE) and its main outputs, coefficients of association and graphs (), have been helping some creative users identify the reasons why they see no gains, and break out of the stagnation periods.
It may be a good idea to measure the number of seconds of effort per set; in addition to other variables such as numbers of sets and repetitions, and the amount of weight lifted. In some cases, an inverted J curve, full or partial (just the left side of it), shows up suggesting that the number of seconds of effort in a particular type of weight training exercise is a better predictor of muscle gain than the number of repetitions used.
The inverted J curve is similar to the one discussed in a previous post on HCE used for weight training improvement, where the supercompensation phenomenon is also discussed ().
Repetitions in the 6-12 range are generally believed to lead to peak anabolic response, and this is generally true for weight training exercises conducted in good form and to failure. It is also generally believed that muscular effort should be maintained for 20 to 120 seconds for peak anabolic response.
The problem is that in certain cases not even 12 repetitions lead to at least 20 seconds of effort. This is usually the case when the repetitions are performed very quickly. There are a couple of good reasons why this may happen: the person has above-average muscular power, or the range of motion used is limited.
What is muscular power, and why would someone want to limit the range of motion used in a weight training exercise?
Muscular power is different from muscular strength, and is normally distributed (bell curve) across the population, like most human traints (). Muscular power is related to the speed with which an individual can move a certain amount of weight. Muscular strength is related to the amount of weight moved. Frequently people who perform amazing feats of strength, like Dennis Rogers (), have above-average muscular power.
As for limiting the range of motion used in a weight training exercise, one of the advantages of doing so is that it reduces the risk of injury, as a wise commenter pointed out here some time ago (). It also has the advantage of increasing the number of variations of an exercise that can be used at different points in time; which is desirable, as variation is critical for sustained supercompensation ().
The picture below is from a YouTube video clip showing champion natural bodybuilder Doug Miller performing 27 repetitions of the deadlift with 405 lbs (). Doug is one of the co-authors of the book Biology for Bodybuilders, which has been reviewed here ().
The point of showing the video clip above is that the range of repetitions used would be perceived as quite high by many bodybuilders, but is nevertheless the one leading to a peak anabolic response for Doug. If you pay careful attention to the video, you will notice that Doug completes the 27 repetitions in 45 seconds, well within the anabolic range. If he had completed only 12 repetitions, at about the same pace, he would have done that a few seconds before hitting the 20-second mark.
Doug completes those 27 repetitions relatively quickly, because he has above-average muscular power, in addition to having above-average muscular strength.
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